Computes chromosomes' length from list — combine_chrom

Computes the length (in bp) of each chromosome from a list of GWAS and DE results as well as candidate gene lists.

Usage

combine_chrom_length(x)

Arguments

x: A list of GWAS_data, DE_data, CAN_data or CUSTOM_data objects.

Value

A tibble with two columns: chromosome (chromosome name) and length (chromosome length in base pair).

Examples

x <- get_example_data()
y <- list("GWAS" = GWAS_data(x[["GWAS"]]),
          "DE" = DE_data(x[["DE"]]),
          "CAN" = CAN_data(x[["CAN"]]))

combine_chrom_length(y)
#> # A tibble: 13 × 2
#>    chromosome   length
#>    <chr>         <dbl>
#>  1 ST4.03ch00 45813526
#>  2 ST4.03ch01 88627702
#>  3 ST4.03ch02 48614228
#>  4 ST4.03ch03 62263578
#>  5 ST4.03ch04 72170119
#>  6 ST4.03ch05 52040326
#>  7 ST4.03ch06 59476545
#>  8 ST4.03ch07 56715111
#>  9 ST4.03ch08 56937627
#> 10 ST4.03ch09 61539681
#> 11 ST4.03ch10 59687482
#> 12 ST4.03ch11 45409456
#> 13 ST4.03ch12 61152223